Sorry, could you clarify?
Unplug the ecu and verify you have chassis ground, 12v+ constant, and 12v+ ignition at all pins you are supposed to have power. We recently did an AEB to AWM conversion and I believe we had this same issue from what I recall. We also had to code out some of the can-bus systems in the newer ecu due to the car having an older k-line instrument cluster, and ABS module, whereas the newer ecu uses can-bus to communicate with those. Do you have a wiring diagram for both ecu's and both chassis? It shouldn't take you very long to figure out the first issue, and then you'll most likely have a few more after that to resolve.